CDS
| Accession Number | TCMCG051C18887 |
| gbkey | CDS |
| Protein Id | XP_024459468.1 |
| Location | complement(join(599593..599685,600177..600389,600488..600703,600992..601123,601444..601559,601870..602243,602407..602552,602635..602793,602871..603041)) |
| Gene | LOC7458490 |
| GeneID | 7458490 |
| Organism | Populus trichocarpa |
Protein
| Length | 539aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_024603700.1 |
| Definition | transcription initiation factor IIF subunit alpha isoform X1 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | K |
| Description | Transcription initiation factor IIF subunit |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03021 [VIEW IN KEGG] |
| KEGG_ko |
ko:K03138
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03022
[VIEW IN KEGG] map03022 [VIEW IN KEGG] |
| GOs |
GO:0003674
[VIEW IN EMBL-EBI] GO:0005488 [VIEW IN EMBL-EBI] GO:0005515 [VIEW IN EMBL-EBI] GO:0008022 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGTCGTTCGATCTTCAGTTACAGCCGTCGTGTAGTGGCTGTGGCAGCACCACAGATTTGTACGGAAGCAATTGCAAGCATATGACGTTGTGCTTGACTTGTGGCAAAACAATGGCGGAGAATCGCGGCAAATGCTTTGATTGTGGCGCTATCGTTACTCGCCTGATTCGAGAGTATAATGTGAGGGCGAGTACGAGTAGCGAAAAGAATTATTTTATAGGAAGATTTGTGACCGGATTGCCAGGTTTTTCGAAGAAAAAAAATGCCGAGAATAAATGGTCTTTGCTGAAAGAAGGAATTCATGGTCGCCAAATTACTGATACTTTGCGGGAGAAGTTTAAGAATAAGCCATGGCTTTTGGAGGATGAAACTGGGCAGTTTCAGTATCAGGGTCATCTTGAAGGGTCGCAATCGGCGACTTATTATCTGTTGATGATGTCTGGGAAAGAGTTTGTTGCTATTCCTGCTGGTTCTTGGTACAACTTTAACAAGGTTGCGCACTATAAGCAACTTACCTTGGAGGAAGCGGAAGAGAAGATGAAGAATAGGAGGAAGACTGCAGATGGATATGAAAGGTGGATGATGAAAGCTGCACATAATGGAGCTGCTGCATTTGGTGAGGTGGAGAAGCCAGATGATAAGGATGGTGTTTCAGCTGGTGGAAGGGGAGGTCGGAAAAAAGCAAACGGTGATGATGATGAGGGCAATGTGTCTGACAAGGGAGAGGAAGACGAGGAGGAAGAGGCGGGAAGGAAGAGTAGGCTTGGACTCAATAAAGGGGGTGGTGATGATGATGAAGAAGGTCCAAGAGGAGGTGATCTTGATATGGATGATGATGATATTGAGAAGGGCGATGATTGGGAGCACGAAGAAATTTTCACTGATGATGATGAAGCTGTTGCCATTGATCCTGAGGAACGGGAAGATTTAGCCCCTGAAGTTCCTGCTCCTCCTGAAATCAAGCAGGATGAAGAGGACGAGGATGAGGAGAATGAGGAGGGAGGACTGAGCAAATCTGGGAAAGAGTTGAAGAAGCTACTTGGGAAAGCAAATGGTCTGAACGAGTCAGATGCAGAAGATGATGATGATGATGACGACATGGATGATGATATTTCTCCTGTACTGGCTCCAAAGCAGAAGGATGCTGTGCCAAAGGAGGAACCTGCTGACAATAGTCCTGCAAAACCAACGCCACCTGGTTCTGCTAAGGGAACCCCTTCTACCTCCAAGTCAGCTAAGGGGAAAAGAAAACTGAATGCTGATGATGCAAAAACTTCTAATGGTGCACCTGTGAAGAAGGTGAAGACAGAAAATGAAGTAAAACCTACCGTGAAAGAAGAAAGCTCTCCTGCTACTAAAGGTACTGCAACTCCTAAAATAATGCCATCATCGTCAAAAACCGGGCCAACATCAGGGCCAACTGGCCCTGTCACCGAGGAAGAGATTAGGGCTGTTTTGTTGCAAAATGGACCTGTAACTACACAGGATCTGGTGGCTAGGTTTAAATCACGACTAAGGACTCCTGAGGACAAGAAGGCTTTTGCGGATATTCTAAGGAGAATTTCTAAGATTCAGAAGACCAGTGGATCTAACTTTGTTGTGTTGAGGGACAAACGATAA |
| Protein: MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYNVRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLLEDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYNFNKVAHYKQLTLEEAEEKMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVSDKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDAEDDDDDDDMDDDISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRKLNADDAKTSNGAPVKKVKTENEVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRDKR |